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Slot: ref_biomaterial

placeholder description; linter will ignore this

URI: MIXS:0000025

Applicable Classes

Name Description Modifies Slot
Checklist placeholder description; linter will ignore this yes
MigsBa placeholder description; linter will ignore this yes
MigsEu placeholder description; linter will ignore this yes
MigsOrg placeholder description; linter will ignore this yes
MigsPl placeholder description; linter will ignore this yes
MigsVi placeholder description; linter will ignore this yes
Mimag placeholder description; linter will ignore this yes
Mims placeholder description; linter will ignore this yes
Misag placeholder description; linter will ignore this yes
Miuvig placeholder description; linter will ignore this yes
MigsBaPlantAssociated placeholder description; linter will ignore this no
MigsBaSediment placeholder description; linter will ignore this no
MigsBaSoil placeholder description; linter will ignore this no
MigsBaWater placeholder description; linter will ignore this no
MimarksC placeholder description; linter will ignore this no
MimarksS placeholder description; linter will ignore this no
MimsPlantAssociated placeholder description; linter will ignore this no
MimsSediment placeholder description; linter will ignore this no
MimsSoil placeholder description; linter will ignore this no
MimsWater placeholder description; linter will ignore this no

Properties

  • Range: String

  • Regex pattern: (10.\d{4,9}/[-._;()/:a-zA-Z0-9]+)|(PMID:(\d{7,8}))|((?:https?://)?(?:www\.)?[\w-]+(?:\.[\w-]+)+[\w.,@?^=%&:/~+#-]*[\w@?^=%&/~+#-])

Identifier and Mapping Information

Annotations

property value
global_raw_definition Primary publication if isolated before genome publication; otherwise, primary genome report.

Schema Source

  • from schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first

LinkML Source

name: ref_biomaterial
annotations:
  global_raw_definition:
    tag: global_raw_definition
    value: Primary publication if isolated before genome publication; otherwise, primary
      genome report.
  occurrence:
    tag: occurrence
    value: '1'
description: placeholder description; linter will ignore this
title: reference for biomaterial
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000025
alias: ref_biomaterial
domain_of:
- Checklist
- MigsBa
- MigsEu
- MigsOrg
- MigsPl
- MigsVi
- Mimag
- Mims
- Misag
- Miuvig
range: string
pattern: (10.\d{4,9}/[-._;()/:a-zA-Z0-9]+)|(PMID:(\d{7,8}))|((?:https?://)?(?:www\.)?[\w-]+(?:\.[\w-]+)+[\w.,@?^=%&:/~+#-]*[\w@?^=%&/~+#-])
structured_pattern:
  syntax: ({DOI})|({PMID})|({URL})