Slot: host_subspecf_genlin

placeholder description; linter will ignore this

URI: MIXS:0001318

Applicable Classes

Name	Description	Modifies Slot
Agriculture	placeholder description; linter will ignore this	yes
FoodFarmEnvironment	placeholder description; linter will ignore this	yes
HostAssociated	placeholder description; linter will ignore this	yes
PlantAssociated	placeholder description; linter will ignore this	yes
MigsBaPlantAssociated	placeholder description; linter will ignore this	no
MimsPlantAssociated	placeholder description; linter will ignore this	no

Properties

• Range: String

Identifier and Mapping Information

Annotations

property	value
global_expected_value	Genetic lineage below lowest rank of NCBI taxonomy, which is subspecies, e.g. serovar, biotype, ecotype, variety, cultivar.

Schema Source

• from schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first

LinkML Source

name: host_subspecf_genlin
annotations:
  global_expected_value:
    tag: global_expected_value
    value: Genetic lineage below lowest rank of NCBI taxonomy, which is subspecies,
      e.g. serovar, biotype, ecotype, variety, cultivar.
  global_raw_definition:
    tag: global_raw_definition
    value: Genetic distinctness of the host organism below the subspecies level e.g.,
      serovar, serotype, biotype, ecotype, variety, cultivar, or any relevant genetic
      typing schemes like Group I plasmid. Subspecies should not be recorded in this
      term, but in the NCBI taxonomy. Supply both the lineage name and the lineage
      rank separated by a colon
  global_value_syntax:
    tag: global_value_syntax
    value: '{rank name}:{text}'
  occurrence:
    tag: occurrence
    value: m
description: placeholder description; linter will ignore this
title: host subspecific genetic lineage
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0001318
alias: host_subspecf_genlin
domain_of:
- Agriculture
- FoodFarmEnvironment
- HostAssociated
- PlantAssociated
range: string