Slot: host_phenotype

placeholder description; linter will ignore this

URI: MIXS:0000874

Applicable Classes

Name	Description	Modifies Slot
Agriculture	placeholder description; linter will ignore this	yes
FoodFarmEnvironment	placeholder description; linter will ignore this	yes
HostAssociated	placeholder description; linter will ignore this	yes
HumanAssociated	placeholder description; linter will ignore this	yes
HumanGut	placeholder description; linter will ignore this	yes
HumanOral	placeholder description; linter will ignore this	yes
HumanSkin	placeholder description; linter will ignore this	yes
HumanVaginal	placeholder description; linter will ignore this	yes
PlantAssociated	placeholder description; linter will ignore this	yes
SymbiontAssociated	placeholder description; linter will ignore this	yes
MigsBaPlantAssociated	placeholder description; linter will ignore this	no
MimsPlantAssociated	placeholder description; linter will ignore this	no

Properties

• Range: String

• Regex pattern: [^s\|][^\r\n\t\|]* [[a-zA-Z]+:[0-9]+]

See Also

• http://purl.bioontology.org/ontology/pato
• http://purl.bioontology.org/ontology/HP

Identifier and Mapping Information

Annotations

property	value
global_raw_definition	Phenotype of human or other host. Use terms from the phenotypic quality ontology (pato) (v 2018-03-27) or the Human Phenotype Ontology (HP) (v 2018-06-13)

Schema Source

• from schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first

LinkML Source

name: host_phenotype
annotations:
  global_raw_definition:
    tag: global_raw_definition
    value: Phenotype of human or other host. Use terms from the phenotypic quality
      ontology (pato) (v 2018-03-27) or the Human Phenotype Ontology (HP) (v 2018-06-13)
  occurrence:
    tag: occurrence
    value: '1'
description: placeholder description; linter will ignore this
title: host phenotype
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
see_also:
- http://purl.bioontology.org/ontology/pato
- http://purl.bioontology.org/ontology/HP
rank: 1000
slot_uri: MIXS:0000874
alias: host_phenotype
domain_of:
- Agriculture
- FoodFarmEnvironment
- HostAssociated
- HumanAssociated
- HumanGut
- HumanOral
- HumanSkin
- HumanVaginal
- PlantAssociated
- SymbiontAssociated
range: string
pattern: '[^s\|][^\r\n\t\|]* [[a-zA-Z]+:[0-9]+]'
structured_pattern:
  syntax: '{term_label} [{term_id}]'