Slot: host_disease_stat
placeholder description; linter will ignore this
URI: MIXS:0000031
Applicable Classes
| Name | Description | Modifies Slot |
|---|---|---|
| Agriculture | placeholder description; linter will ignore this | yes |
| Checklist | placeholder description; linter will ignore this | yes |
| FoodFarmEnvironment | placeholder description; linter will ignore this | yes |
| HostAssociated | placeholder description; linter will ignore this | yes |
| HumanAssociated | placeholder description; linter will ignore this | yes |
| HumanGut | placeholder description; linter will ignore this | yes |
| HumanOral | placeholder description; linter will ignore this | yes |
| HumanSkin | placeholder description; linter will ignore this | yes |
| HumanVaginal | placeholder description; linter will ignore this | yes |
| MigsBa | placeholder description; linter will ignore this | yes |
| MigsEu | placeholder description; linter will ignore this | yes |
| MigsVi | placeholder description; linter will ignore this | yes |
| Miuvig | placeholder description; linter will ignore this | yes |
| PlantAssociated | placeholder description; linter will ignore this | yes |
| MigsBaPlantAssociated | placeholder description; linter will ignore this | no |
| MigsBaSediment | placeholder description; linter will ignore this | no |
| MigsBaSoil | placeholder description; linter will ignore this | no |
| MigsBaWater | placeholder description; linter will ignore this | no |
| MigsOrg | placeholder description; linter will ignore this | no |
| MigsPl | placeholder description; linter will ignore this | no |
| Mimag | placeholder description; linter will ignore this | no |
| MimarksC | placeholder description; linter will ignore this | no |
| MimarksS | placeholder description; linter will ignore this | no |
| Mims | placeholder description; linter will ignore this | no |
| MimsPlantAssociated | placeholder description; linter will ignore this | no |
| MimsSediment | placeholder description; linter will ignore this | no |
| MimsSoil | placeholder description; linter will ignore this | no |
| MimsWater | placeholder description; linter will ignore this | no |
| Misag | placeholder description; linter will ignore this | no |
Properties
-
Range: String
-
Regex pattern:
((([^s\|][^\r\n\t\|]* [[a-zA-Z]+:[0-9]+])|[^s\|][^\r\n\t\|]*)\|)*(([^s\|][^\r\n\t\|]* [[a-zA-Z]+:[0-9]+])|[^s\|][^\r\n\t\|]*)
Identifier and Mapping Information
Annotations
| property | value |
|---|---|
| global_expected_value | disease name or Disease Ontology term |
Schema Source
- from schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
LinkML Source
name: host_disease_stat
annotations:
global_expected_value:
tag: global_expected_value
value: disease name or Disease Ontology term
global_raw_definition:
tag: global_raw_definition
value: List of diseases with which the host has been diagnosed
global_value_syntax:
tag: global_value_syntax
value: '{term_label} [{term_id}]|{text}'
occurrence:
tag: occurrence
value: m
description: placeholder description; linter will ignore this
title: host disease status
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000031
alias: host_disease_stat
domain_of:
- Agriculture
- Checklist
- FoodFarmEnvironment
- HostAssociated
- HumanAssociated
- HumanGut
- HumanOral
- HumanSkin
- HumanVaginal
- MigsBa
- MigsEu
- MigsVi
- Miuvig
- PlantAssociated
range: string
pattern: ((([^s\|][^\r\n\t\|]* [[a-zA-Z]+:[0-9]+])|[^s\|][^\r\n\t\|]*)\|)*(([^s\|][^\r\n\t\|]*
[[a-zA-Z]+:[0-9]+])|[^s\|][^\r\n\t\|]*)
structured_pattern:
syntax: ((({term_label} [{term_id}])|{free_text})\|)*(({term_label} [{term_id}])|{free_text})