Slot: env_local_scale
placeholder description; linter will ignore this
URI: MIXS:0000013
Applicable Classes
| Name | Description | Modifies Slot |
|---|---|---|
| Checklist | placeholder description; linter will ignore this | yes |
| FoodAnimalAndAnimalFeed | placeholder description; linter will ignore this | yes |
| FoodFarmEnvironment | placeholder description; linter will ignore this | yes |
| FoodFoodProductionFacility | placeholder description; linter will ignore this | yes |
| FoodHumanFoods | placeholder description; linter will ignore this | yes |
| MigsBa | placeholder description; linter will ignore this | yes |
| MigsEu | placeholder description; linter will ignore this | yes |
| MigsOrg | placeholder description; linter will ignore this | yes |
| MigsPl | placeholder description; linter will ignore this | yes |
| MigsVi | placeholder description; linter will ignore this | yes |
| Mimag | placeholder description; linter will ignore this | yes |
| MimarksC | placeholder description; linter will ignore this | yes |
| MimarksS | placeholder description; linter will ignore this | yes |
| Mims | placeholder description; linter will ignore this | yes |
| Misag | placeholder description; linter will ignore this | yes |
| Miuvig | placeholder description; linter will ignore this | yes |
| SymbiontAssociated | placeholder description; linter will ignore this | yes |
| MigsBaPlantAssociated | placeholder description; linter will ignore this | no |
| MigsBaSediment | placeholder description; linter will ignore this | no |
| MigsBaSoil | placeholder description; linter will ignore this | no |
| MigsBaWater | placeholder description; linter will ignore this | no |
| MimsPlantAssociated | placeholder description; linter will ignore this | no |
| MimsSediment | placeholder description; linter will ignore this | no |
| MimsSoil | placeholder description; linter will ignore this | no |
| MimsWater | placeholder description; linter will ignore this | no |
Properties
-
Range: String
-
Regex pattern:
[^s\|][^\r\n\t\|]* [[a-zA-Z]+:[0-9]+]
See Also
Identifier and Mapping Information
Annotations
| property | value |
|---|---|
| global_expected_value | Environmental entities having causal influences upon the entity at time of sampling. |
Schema Source
- from schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
LinkML Source
name: env_local_scale
annotations:
global_expected_value:
tag: global_expected_value
value: Environmental entities having causal influences upon the entity at time
of sampling.
global_raw_definition:
tag: global_raw_definition
value: Entity or entities which are in the sample or specimen's local vicinity
and which you believe have significant causal influences on your sample or specimen.
We recommend using EnvO terms which are of smaller spatial grain than your entry
for env_broad_scale. Terms, such as anatomical sites, from other OBO Library
ontologies which interoperate with EnvO (e.g. UBERON) are accepted in this field
occurrence:
tag: occurrence
value: '1'
description: placeholder description; linter will ignore this
title: local environmental context
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
see_also:
- https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS
rank: 1000
slot_uri: MIXS:0000013
alias: env_local_scale
domain_of:
- Checklist
- FoodAnimalAndAnimalFeed
- FoodFarmEnvironment
- FoodFoodProductionFacility
- FoodHumanFoods
- MigsBa
- MigsEu
- MigsOrg
- MigsPl
- MigsVi
- Mimag
- MimarksC
- MimarksS
- Mims
- Misag
- Miuvig
- SymbiontAssociated
range: string
pattern: '[^s\|][^\r\n\t\|]* [[a-zA-Z]+:[0-9]+]'
structured_pattern:
syntax: '{term_label} [{term_id}]'