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Slot: chem_mutagen

placeholder description; linter will ignore this

URI: MIXS:0000555

Applicable Classes

Name Description Modifies Slot
PlantAssociated placeholder description; linter will ignore this yes
MigsBaPlantAssociated placeholder description; linter will ignore this no
MimsPlantAssociated placeholder description; linter will ignore this no

Properties

  • Range: String

  • Regex pattern: [^s\|][^\r\n\t\|]*;[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)? [^s\|][^\r\n\t\|]*;R[+-]?[1-9][0-9]*/\d{4}-\d\d-\d\d[Tt]\d\d:\d\d(:\d\d(\.\d+)?([Zz]|[\+\-]\d\d:\d\d)?)?/\d{4}-\d\d-\d\d[Tt]\d\d:\d\d(:\d\d(\.\d+)?([Zz]|[\+\-]\d\d:\d\d)?)?/P(?=\d+[YMWD])(\d+Y)?(\d+M)?(\d+W)?(\d+D)?(T(?=\d+[HMS])(\d+H)?(\d+M)?(\d+S)?)?

Examples

Value
nitrous acid;0.5 milligram per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M

Identifier and Mapping Information

Annotations

property value
global_expected_value mutagen name;mutagen amount;treatment interval and duration

Schema Source

  • from schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first

LinkML Source

name: chem_mutagen
annotations:
  global_expected_value:
    tag: global_expected_value
    value: mutagen name;mutagen amount;treatment interval and duration
  global_preferred_unit:
    tag: global_preferred_unit
    value: mg/l
  global_raw_definition:
    tag: global_raw_definition
    value: Treatment involving use of mutagens; should include the name of mutagen,
      amount administered, treatment regimen including how many times the treatment
      was repeated, how long each treatment lasted, and the start and end time of
      the entire treatment.
  occurrence:
    tag: occurrence
    value: m
description: placeholder description; linter will ignore this
title: chemical mutagen
examples:
- value: nitrous acid;0.5 milligram per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000555
alias: chem_mutagen
domain_of:
- PlantAssociated
range: string
pattern: '[^s\|][^\r\n\t\|]*;[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)? [^s\|][^\r\n\t\|]*;R[+-]?[1-9][0-9]*/\d{4}-\d\d-\d\d[Tt]\d\d:\d\d(:\d\d(\.\d+)?([Zz]|[\+\-]\d\d:\d\d)?)?/\d{4}-\d\d-\d\d[Tt]\d\d:\d\d(:\d\d(\.\d+)?([Zz]|[\+\-]\d\d:\d\d)?)?/P(?=\d+[YMWD])(\d+Y)?(\d+M)?(\d+W)?(\d+D)?(T(?=\d+[HMS])(\d+H)?(\d+M)?(\d+S)?)?'
structured_pattern:
  syntax: '{free_text};{float} {unit};R{integer}/{start_time}/{end_time}/{period}'