Class: Soil
placeholder description; linter will ignore this
URI: MIXS:0016012
classDiagram
class Soil
EnvironmentalPackage <|-- Soil
Soil <|-- MigsBaSoil
Soil <|-- MimsSoil
Soil : agrochem_addition
Soil : al_sat
Soil : al_sat_meth
Soil : annual_precpt
Soil : annual_temp
Soil : crop_rotation
Soil : cur_land_use
Soil --|> CUR_LAND_USE_ENUM : cur_land_use
Soil : cur_vegetation
Soil : cur_vegetation_meth
Soil : drainage_class
Soil --|> DRAINAGE_CLASS_ENUM : drainage_class
Soil : elev
Soil : extreme_event
Soil : fao_class
Soil --|> FAO_CLASS_ENUM : fao_class
Soil : fire
Soil : flooding
Soil : heavy_metals
Soil : heavy_metals_meth
Soil : horizon_meth
Soil : link_addit_analys
Soil : link_class_info
Soil : link_climate_info
Soil : local_class
Soil : local_class_meth
Soil : microbial_biomass
Soil : misc_param
Soil : org_matter
Soil : org_nitro
Soil : ph
Soil : ph_meth
Soil : pool_dna_extracts
Soil : previous_land_use
Soil : previous_land_use_meth
Soil : profile_position
Soil --|> PROFILE_POSITION_ENUM : profile_position
Soil : project_name
Soil : salinity_meth
Soil : samp_vol_we_dna_ext
Soil : season_precpt
Soil : season_temp
Soil : sieving
Soil : slope_aspect
Soil : slope_gradient
Soil : soil_type
Soil : soil_type_meth
Soil : store_cond
Soil : temp
Soil : tillage
Soil --|> TILLAGE_ENUM : tillage
Soil : tot_org_c_meth
Soil : tot_org_carb
Soil : water_cont_soil_meth
Soil : water_content
Inheritance
- EnvironmentalPackage
- Soil
- MigsBaSoil [ MigsBa]
- MimsSoil [ Mims]
- Soil
Slots
Name | Cardinality and Range | Description | Inheritance |
---|---|---|---|
agrochem_addition | 0..1 String |
placeholder description; linter will ignore this | direct |
al_sat | 0..1 String |
placeholder description; linter will ignore this | direct |
al_sat_meth | 0..1 String |
placeholder description; linter will ignore this | direct |
annual_precpt | 0..1 String |
placeholder description; linter will ignore this | direct |
annual_temp | 0..1 String |
placeholder description; linter will ignore this | direct |
crop_rotation | 0..1 String |
placeholder description; linter will ignore this | direct |
cur_land_use | 0..1 CURLANDUSEENUM |
placeholder description; linter will ignore this | direct |
cur_vegetation | 0..1 String |
placeholder description; linter will ignore this | direct |
cur_vegetation_meth | 0..1 String |
placeholder description; linter will ignore this | direct |
drainage_class | 0..1 DRAINAGECLASSENUM |
placeholder description; linter will ignore this | direct |
extreme_event | 0..1 String |
placeholder description; linter will ignore this | direct |
fao_class | 0..1 FAOCLASSENUM |
placeholder description; linter will ignore this | direct |
fire | 0..1 String |
placeholder description; linter will ignore this | direct |
flooding | 0..1 String |
placeholder description; linter will ignore this | direct |
heavy_metals | 0..1 String |
placeholder description; linter will ignore this | direct |
heavy_metals_meth | 0..1 String |
placeholder description; linter will ignore this | direct |
horizon_meth | 0..1 String |
placeholder description; linter will ignore this | direct |
link_addit_analys | 0..1 String |
placeholder description; linter will ignore this | direct |
link_class_info | 0..1 String |
placeholder description; linter will ignore this | direct |
link_climate_info | 0..1 String |
placeholder description; linter will ignore this | direct |
local_class | 0..1 String |
placeholder description; linter will ignore this | direct |
local_class_meth | 0..1 String |
placeholder description; linter will ignore this | direct |
microbial_biomass | 0..1 String |
placeholder description; linter will ignore this | direct |
misc_param | 0..1 String |
placeholder description; linter will ignore this | direct |
org_matter | 0..1 String |
placeholder description; linter will ignore this | direct |
org_nitro | 0..1 String |
placeholder description; linter will ignore this | direct |
ph | 0..1 Float |
placeholder description; linter will ignore this | direct |
ph_meth | 0..1 String |
placeholder description; linter will ignore this | direct |
pool_dna_extracts | 0..1 String |
placeholder description; linter will ignore this | direct |
previous_land_use | 0..1 String |
placeholder description; linter will ignore this | direct |
previous_land_use_meth | 0..1 String |
placeholder description; linter will ignore this | direct |
profile_position | 0..1 PROFILEPOSITIONENUM |
placeholder description; linter will ignore this | direct |
salinity_meth | 0..1 String |
placeholder description; linter will ignore this | direct |
samp_vol_we_dna_ext | 0..1 String |
placeholder description; linter will ignore this | direct |
season_precpt | 0..1 String |
placeholder description; linter will ignore this | direct |
season_temp | 0..1 String |
placeholder description; linter will ignore this | direct |
sieving | 0..1 String |
placeholder description; linter will ignore this | direct |
slope_aspect | 0..1 String |
placeholder description; linter will ignore this | direct |
slope_gradient | 0..1 String |
placeholder description; linter will ignore this | direct |
soil_type | 0..1 String |
placeholder description; linter will ignore this | direct |
soil_type_meth | 0..1 String |
placeholder description; linter will ignore this | direct |
store_cond | 0..1 String |
placeholder description; linter will ignore this | direct |
temp | 0..1 String |
placeholder description; linter will ignore this | direct |
tillage | 0..* TILLAGEENUM |
placeholder description; linter will ignore this | direct |
tot_org_c_meth | 0..1 String |
placeholder description; linter will ignore this | direct |
tot_org_carb | 0..1 String |
placeholder description; linter will ignore this | direct |
water_cont_soil_meth | 0..1 String |
placeholder description; linter will ignore this | direct |
water_content | 0..1 String |
placeholder description; linter will ignore this | direct |
elev | 1..1 String |
placeholder description; linter will ignore this | direct |
project_name | 1..1 String |
placeholder description; linter will ignore this | direct |
Identifier and Mapping Information
Schema Source
- from schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
Mappings
Mapping Type | Mapped Value |
---|---|
self | MIXS:0016012 |
native | MIXS:Soil |
LinkML Source
Direct
name: Soil
description: placeholder description; linter will ignore this
title: soil
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
is_a: EnvironmentalPackage
slots:
- agrochem_addition
- al_sat
- al_sat_meth
- annual_precpt
- annual_temp
- crop_rotation
- cur_land_use
- cur_vegetation
- cur_vegetation_meth
- drainage_class
- extreme_event
- fao_class
- fire
- flooding
- heavy_metals
- heavy_metals_meth
- horizon_meth
- link_addit_analys
- link_class_info
- link_climate_info
- local_class
- local_class_meth
- microbial_biomass
- misc_param
- org_matter
- org_nitro
- ph
- ph_meth
- pool_dna_extracts
- previous_land_use
- previous_land_use_meth
- profile_position
- salinity_meth
- samp_vol_we_dna_ext
- season_precpt
- season_temp
- sieving
- slope_aspect
- slope_gradient
- soil_type
- soil_type_meth
- store_cond
- temp
- tillage
- tot_org_c_meth
- tot_org_carb
- water_cont_soil_meth
- water_content
- elev
- project_name
slot_usage:
agrochem_addition:
name: agrochem_addition
domain_of:
- Agriculture
- Soil
al_sat:
name: al_sat
domain_of:
- Soil
al_sat_meth:
name: al_sat_meth
domain_of:
- Soil
annual_precpt:
name: annual_precpt
domain_of:
- Agriculture
- Soil
annual_temp:
name: annual_temp
domain_of:
- Agriculture
- Soil
crop_rotation:
name: crop_rotation
domain_of:
- Agriculture
- FoodFarmEnvironment
- Soil
cur_land_use:
name: cur_land_use
domain_of:
- Agriculture
- Soil
cur_vegetation:
name: cur_vegetation
domain_of:
- Agriculture
- Soil
cur_vegetation_meth:
name: cur_vegetation_meth
domain_of:
- Agriculture
- Soil
drainage_class:
name: drainage_class
domain_of:
- Agriculture
- Soil
elev:
name: elev
domain_of:
- Agriculture
- Air
- Checklist
- HostAssociated
- HydrocarbonResourcesCores
- MicrobialMatBiofilm
- MigsBa
- MigsEu
- MigsOrg
- MigsPl
- MigsVi
- Mimag
- MimarksC
- MimarksS
- Mims
- Misag
- MiscellaneousNaturalOrArtificialEnvironment
- Miuvig
- PlantAssociated
- Sediment
- Soil
- SymbiontAssociated
- Water
required: true
extreme_event:
name: extreme_event
domain_of:
- Agriculture
- Soil
fao_class:
name: fao_class
domain_of:
- Agriculture
- Soil
fire:
name: fire
domain_of:
- Agriculture
- Soil
flooding:
name: flooding
domain_of:
- Agriculture
- Soil
heavy_metals:
name: heavy_metals
domain_of:
- Soil
heavy_metals_meth:
name: heavy_metals_meth
domain_of:
- Agriculture
- Soil
horizon_meth:
name: horizon_meth
domain_of:
- Agriculture
- Soil
link_addit_analys:
name: link_addit_analys
domain_of:
- Soil
link_class_info:
name: link_class_info
domain_of:
- Agriculture
- Soil
link_climate_info:
name: link_climate_info
domain_of:
- Agriculture
- Soil
local_class:
name: local_class
domain_of:
- Agriculture
- Soil
local_class_meth:
name: local_class_meth
domain_of:
- Agriculture
- Soil
microbial_biomass:
name: microbial_biomass
domain_of:
- Agriculture
- Soil
misc_param:
name: misc_param
domain_of:
- Agriculture
- Air
- FoodAnimalAndAnimalFeed
- FoodFarmEnvironment
- FoodFoodProductionFacility
- FoodHumanFoods
- HostAssociated
- HumanAssociated
- HumanGut
- HumanOral
- HumanSkin
- HumanVaginal
- HydrocarbonResourcesCores
- HydrocarbonResourcesFluidsSwabs
- MicrobialMatBiofilm
- MiscellaneousNaturalOrArtificialEnvironment
- PlantAssociated
- Sediment
- Soil
- SymbiontAssociated
- WastewaterSludge
- Water
org_matter:
name: org_matter
domain_of:
- MicrobialMatBiofilm
- MiscellaneousNaturalOrArtificialEnvironment
- Sediment
- Soil
- Water
org_nitro:
name: org_nitro
domain_of:
- MicrobialMatBiofilm
- MiscellaneousNaturalOrArtificialEnvironment
- Sediment
- Soil
- Water
ph:
name: ph
domain_of:
- FoodFarmEnvironment
- HydrocarbonResourcesCores
- HydrocarbonResourcesFluidsSwabs
- MicrobialMatBiofilm
- MiscellaneousNaturalOrArtificialEnvironment
- Sediment
- Soil
- WastewaterSludge
- Water
ph_meth:
name: ph_meth
domain_of:
- Agriculture
- FoodFarmEnvironment
- Soil
pool_dna_extracts:
name: pool_dna_extracts
domain_of:
- Agriculture
- FoodAnimalAndAnimalFeed
- FoodFoodProductionFacility
- FoodHumanFoods
- Soil
previous_land_use:
name: previous_land_use
domain_of:
- Agriculture
- FoodFarmEnvironment
- Soil
previous_land_use_meth:
name: previous_land_use_meth
domain_of:
- Agriculture
- Soil
profile_position:
name: profile_position
domain_of:
- Agriculture
- Soil
project_name:
name: project_name
domain_of:
- Air
- BuiltEnvironment
- Checklist
- FoodAnimalAndAnimalFeed
- FoodFarmEnvironment
- FoodFoodProductionFacility
- FoodHumanFoods
- HostAssociated
- HumanAssociated
- HumanGut
- HumanOral
- HumanSkin
- HumanVaginal
- HydrocarbonResourcesCores
- HydrocarbonResourcesFluidsSwabs
- MicrobialMatBiofilm
- MigsBa
- MigsEu
- MigsOrg
- MigsPl
- MigsVi
- Mimag
- MimarksC
- MimarksS
- Mims
- Misag
- MiscellaneousNaturalOrArtificialEnvironment
- Miuvig
- PlantAssociated
- Sediment
- Soil
- SymbiontAssociated
- WastewaterSludge
- Water
required: true
salinity_meth:
name: salinity_meth
domain_of:
- FoodFarmEnvironment
- Soil
samp_vol_we_dna_ext:
name: samp_vol_we_dna_ext
domain_of:
- Agriculture
- Air
- Checklist
- FoodAnimalAndAnimalFeed
- FoodFarmEnvironment
- FoodFoodProductionFacility
- FoodHumanFoods
- HostAssociated
- HumanAssociated
- HumanGut
- HumanOral
- HumanSkin
- HumanVaginal
- HydrocarbonResourcesCores
- HydrocarbonResourcesFluidsSwabs
- MicrobialMatBiofilm
- MigsBa
- MigsEu
- MigsOrg
- MigsPl
- MigsVi
- Mimag
- MimarksC
- MimarksS
- Mims
- Misag
- MiscellaneousNaturalOrArtificialEnvironment
- Miuvig
- PlantAssociated
- Sediment
- Soil
- SymbiontAssociated
- WastewaterSludge
- Water
season_precpt:
name: season_precpt
domain_of:
- Agriculture
- FoodFarmEnvironment
- Soil
season_temp:
name: season_temp
domain_of:
- Agriculture
- FoodFarmEnvironment
- Soil
sieving:
name: sieving
domain_of:
- Agriculture
- Soil
slope_aspect:
name: slope_aspect
domain_of:
- Agriculture
- Soil
slope_gradient:
name: slope_gradient
domain_of:
- Agriculture
- Soil
soil_type:
name: soil_type
domain_of:
- Agriculture
- FoodFarmEnvironment
- Soil
soil_type_meth:
name: soil_type_meth
domain_of:
- Agriculture
- FoodFarmEnvironment
- Soil
store_cond:
name: store_cond
domain_of:
- Agriculture
- Soil
temp:
name: temp
domain_of:
- Agriculture
- Air
- Checklist
- FoodAnimalAndAnimalFeed
- FoodFarmEnvironment
- FoodHumanFoods
- HostAssociated
- HumanAssociated
- HumanGut
- HumanOral
- HumanSkin
- HumanVaginal
- HydrocarbonResourcesCores
- HydrocarbonResourcesFluidsSwabs
- MicrobialMatBiofilm
- MigsBa
- MigsEu
- MigsOrg
- MigsPl
- MigsVi
- Mimag
- MimarksC
- MimarksS
- Mims
- Misag
- MiscellaneousNaturalOrArtificialEnvironment
- Miuvig
- PlantAssociated
- Sediment
- Soil
- SymbiontAssociated
- WastewaterSludge
- Water
tillage:
name: tillage
domain_of:
- Agriculture
- FoodFarmEnvironment
- Soil
tot_org_c_meth:
name: tot_org_c_meth
domain_of:
- Agriculture
- FoodFarmEnvironment
- Soil
tot_org_carb:
name: tot_org_carb
domain_of:
- Agriculture
- FoodFarmEnvironment
- MicrobialMatBiofilm
- Sediment
- Soil
water_cont_soil_meth:
name: water_cont_soil_meth
domain_of:
- Soil
water_content:
name: water_content
domain_of:
- MicrobialMatBiofilm
- Sediment
- Soil
class_uri: MIXS:0016012
Induced
name: Soil
description: placeholder description; linter will ignore this
title: soil
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
is_a: EnvironmentalPackage
slot_usage:
agrochem_addition:
name: agrochem_addition
domain_of:
- Agriculture
- Soil
al_sat:
name: al_sat
domain_of:
- Soil
al_sat_meth:
name: al_sat_meth
domain_of:
- Soil
annual_precpt:
name: annual_precpt
domain_of:
- Agriculture
- Soil
annual_temp:
name: annual_temp
domain_of:
- Agriculture
- Soil
crop_rotation:
name: crop_rotation
domain_of:
- Agriculture
- FoodFarmEnvironment
- Soil
cur_land_use:
name: cur_land_use
domain_of:
- Agriculture
- Soil
cur_vegetation:
name: cur_vegetation
domain_of:
- Agriculture
- Soil
cur_vegetation_meth:
name: cur_vegetation_meth
domain_of:
- Agriculture
- Soil
drainage_class:
name: drainage_class
domain_of:
- Agriculture
- Soil
elev:
name: elev
domain_of:
- Agriculture
- Air
- Checklist
- HostAssociated
- HydrocarbonResourcesCores
- MicrobialMatBiofilm
- MigsBa
- MigsEu
- MigsOrg
- MigsPl
- MigsVi
- Mimag
- MimarksC
- MimarksS
- Mims
- Misag
- MiscellaneousNaturalOrArtificialEnvironment
- Miuvig
- PlantAssociated
- Sediment
- Soil
- SymbiontAssociated
- Water
required: true
extreme_event:
name: extreme_event
domain_of:
- Agriculture
- Soil
fao_class:
name: fao_class
domain_of:
- Agriculture
- Soil
fire:
name: fire
domain_of:
- Agriculture
- Soil
flooding:
name: flooding
domain_of:
- Agriculture
- Soil
heavy_metals:
name: heavy_metals
domain_of:
- Soil
heavy_metals_meth:
name: heavy_metals_meth
domain_of:
- Agriculture
- Soil
horizon_meth:
name: horizon_meth
domain_of:
- Agriculture
- Soil
link_addit_analys:
name: link_addit_analys
domain_of:
- Soil
link_class_info:
name: link_class_info
domain_of:
- Agriculture
- Soil
link_climate_info:
name: link_climate_info
domain_of:
- Agriculture
- Soil
local_class:
name: local_class
domain_of:
- Agriculture
- Soil
local_class_meth:
name: local_class_meth
domain_of:
- Agriculture
- Soil
microbial_biomass:
name: microbial_biomass
domain_of:
- Agriculture
- Soil
misc_param:
name: misc_param
domain_of:
- Agriculture
- Air
- FoodAnimalAndAnimalFeed
- FoodFarmEnvironment
- FoodFoodProductionFacility
- FoodHumanFoods
- HostAssociated
- HumanAssociated
- HumanGut
- HumanOral
- HumanSkin
- HumanVaginal
- HydrocarbonResourcesCores
- HydrocarbonResourcesFluidsSwabs
- MicrobialMatBiofilm
- MiscellaneousNaturalOrArtificialEnvironment
- PlantAssociated
- Sediment
- Soil
- SymbiontAssociated
- WastewaterSludge
- Water
org_matter:
name: org_matter
domain_of:
- MicrobialMatBiofilm
- MiscellaneousNaturalOrArtificialEnvironment
- Sediment
- Soil
- Water
org_nitro:
name: org_nitro
domain_of:
- MicrobialMatBiofilm
- MiscellaneousNaturalOrArtificialEnvironment
- Sediment
- Soil
- Water
ph:
name: ph
domain_of:
- FoodFarmEnvironment
- HydrocarbonResourcesCores
- HydrocarbonResourcesFluidsSwabs
- MicrobialMatBiofilm
- MiscellaneousNaturalOrArtificialEnvironment
- Sediment
- Soil
- WastewaterSludge
- Water
ph_meth:
name: ph_meth
domain_of:
- Agriculture
- FoodFarmEnvironment
- Soil
pool_dna_extracts:
name: pool_dna_extracts
domain_of:
- Agriculture
- FoodAnimalAndAnimalFeed
- FoodFoodProductionFacility
- FoodHumanFoods
- Soil
previous_land_use:
name: previous_land_use
domain_of:
- Agriculture
- FoodFarmEnvironment
- Soil
previous_land_use_meth:
name: previous_land_use_meth
domain_of:
- Agriculture
- Soil
profile_position:
name: profile_position
domain_of:
- Agriculture
- Soil
project_name:
name: project_name
domain_of:
- Air
- BuiltEnvironment
- Checklist
- FoodAnimalAndAnimalFeed
- FoodFarmEnvironment
- FoodFoodProductionFacility
- FoodHumanFoods
- HostAssociated
- HumanAssociated
- HumanGut
- HumanOral
- HumanSkin
- HumanVaginal
- HydrocarbonResourcesCores
- HydrocarbonResourcesFluidsSwabs
- MicrobialMatBiofilm
- MigsBa
- MigsEu
- MigsOrg
- MigsPl
- MigsVi
- Mimag
- MimarksC
- MimarksS
- Mims
- Misag
- MiscellaneousNaturalOrArtificialEnvironment
- Miuvig
- PlantAssociated
- Sediment
- Soil
- SymbiontAssociated
- WastewaterSludge
- Water
required: true
salinity_meth:
name: salinity_meth
domain_of:
- FoodFarmEnvironment
- Soil
samp_vol_we_dna_ext:
name: samp_vol_we_dna_ext
domain_of:
- Agriculture
- Air
- Checklist
- FoodAnimalAndAnimalFeed
- FoodFarmEnvironment
- FoodFoodProductionFacility
- FoodHumanFoods
- HostAssociated
- HumanAssociated
- HumanGut
- HumanOral
- HumanSkin
- HumanVaginal
- HydrocarbonResourcesCores
- HydrocarbonResourcesFluidsSwabs
- MicrobialMatBiofilm
- MigsBa
- MigsEu
- MigsOrg
- MigsPl
- MigsVi
- Mimag
- MimarksC
- MimarksS
- Mims
- Misag
- MiscellaneousNaturalOrArtificialEnvironment
- Miuvig
- PlantAssociated
- Sediment
- Soil
- SymbiontAssociated
- WastewaterSludge
- Water
season_precpt:
name: season_precpt
domain_of:
- Agriculture
- FoodFarmEnvironment
- Soil
season_temp:
name: season_temp
domain_of:
- Agriculture
- FoodFarmEnvironment
- Soil
sieving:
name: sieving
domain_of:
- Agriculture
- Soil
slope_aspect:
name: slope_aspect
domain_of:
- Agriculture
- Soil
slope_gradient:
name: slope_gradient
domain_of:
- Agriculture
- Soil
soil_type:
name: soil_type
domain_of:
- Agriculture
- FoodFarmEnvironment
- Soil
soil_type_meth:
name: soil_type_meth
domain_of:
- Agriculture
- FoodFarmEnvironment
- Soil
store_cond:
name: store_cond
domain_of:
- Agriculture
- Soil
temp:
name: temp
domain_of:
- Agriculture
- Air
- Checklist
- FoodAnimalAndAnimalFeed
- FoodFarmEnvironment
- FoodHumanFoods
- HostAssociated
- HumanAssociated
- HumanGut
- HumanOral
- HumanSkin
- HumanVaginal
- HydrocarbonResourcesCores
- HydrocarbonResourcesFluidsSwabs
- MicrobialMatBiofilm
- MigsBa
- MigsEu
- MigsOrg
- MigsPl
- MigsVi
- Mimag
- MimarksC
- MimarksS
- Mims
- Misag
- MiscellaneousNaturalOrArtificialEnvironment
- Miuvig
- PlantAssociated
- Sediment
- Soil
- SymbiontAssociated
- WastewaterSludge
- Water
tillage:
name: tillage
domain_of:
- Agriculture
- FoodFarmEnvironment
- Soil
tot_org_c_meth:
name: tot_org_c_meth
domain_of:
- Agriculture
- FoodFarmEnvironment
- Soil
tot_org_carb:
name: tot_org_carb
domain_of:
- Agriculture
- FoodFarmEnvironment
- MicrobialMatBiofilm
- Sediment
- Soil
water_cont_soil_meth:
name: water_cont_soil_meth
domain_of:
- Soil
water_content:
name: water_content
domain_of:
- MicrobialMatBiofilm
- Sediment
- Soil
attributes:
agrochem_addition:
name: agrochem_addition
description: placeholder description; linter will ignore this
title: history/agrochemical additions
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000639
alias: agrochem_addition
owner: Soil
domain_of:
- Agriculture
- Soil
range: string
al_sat:
name: al_sat
description: placeholder description; linter will ignore this
title: extreme_unusual_properties/Al saturation
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000607
alias: al_sat
owner: Soil
domain_of:
- Soil
range: string
pattern: '[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)? [^s\|][^\r\n\t\|]*'
structured_pattern:
syntax: '{float} {unit}'
al_sat_meth:
name: al_sat_meth
description: placeholder description; linter will ignore this
title: extreme_unusual_properties/Al saturation method
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000324
alias: al_sat_meth
owner: Soil
domain_of:
- Soil
range: string
pattern: (10.\d{4,9}/[-._;()/:a-zA-Z0-9]+)|(PMID:(\d{7,8}))|((?:https?://)?(?:www\.)?[\w-]+(?:\.[\w-]+)+[\w.,@?^=%&:/~+#-]*[\w@?^=%&/~+#-])
structured_pattern:
syntax: ({DOI})|({PMID})|({URL})
annual_precpt:
name: annual_precpt
description: placeholder description; linter will ignore this
title: mean annual precipitation
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000644
alias: annual_precpt
owner: Soil
domain_of:
- Agriculture
- Soil
range: string
pattern: '[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)? [^s\|][^\r\n\t\|]*'
structured_pattern:
syntax: '{float} {unit}'
annual_temp:
name: annual_temp
description: placeholder description; linter will ignore this
title: mean annual temperature
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000642
alias: annual_temp
owner: Soil
domain_of:
- Agriculture
- Soil
range: string
pattern: '[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)? [^s\|][^\r\n\t\|]*'
structured_pattern:
syntax: '{float} {unit}'
crop_rotation:
name: crop_rotation
description: placeholder description; linter will ignore this
title: history/crop rotation
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000318
alias: crop_rotation
owner: Soil
domain_of:
- Agriculture
- FoodFarmEnvironment
- Soil
range: string
cur_land_use:
name: cur_land_use
description: placeholder description; linter will ignore this
title: current land use
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0001080
alias: cur_land_use
owner: Soil
domain_of:
- Agriculture
- Soil
range: CUR_LAND_USE_ENUM
cur_vegetation:
name: cur_vegetation
description: placeholder description; linter will ignore this
title: current vegetation
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000312
alias: cur_vegetation
owner: Soil
domain_of:
- Agriculture
- Soil
range: string
pattern: '[^s\|][^\r\n\t\|]*'
structured_pattern:
syntax: '{free_text}'
cur_vegetation_meth:
name: cur_vegetation_meth
description: placeholder description; linter will ignore this
title: current vegetation method
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000314
alias: cur_vegetation_meth
owner: Soil
domain_of:
- Agriculture
- Soil
range: string
pattern: (10.\d{4,9}/[-._;()/:a-zA-Z0-9]+)|(PMID:(\d{7,8}))|((?:https?://)?(?:www\.)?[\w-]+(?:\.[\w-]+)+[\w.,@?^=%&:/~+#-]*[\w@?^=%&/~+#-])
structured_pattern:
syntax: ({DOI})|({PMID})|({URL})
drainage_class:
name: drainage_class
description: placeholder description; linter will ignore this
title: drainage classification
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0001085
alias: drainage_class
owner: Soil
domain_of:
- Agriculture
- Soil
range: DRAINAGE_CLASS_ENUM
extreme_event:
name: extreme_event
description: placeholder description; linter will ignore this
title: history/extreme events
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000320
alias: extreme_event
owner: Soil
domain_of:
- Agriculture
- Soil
range: string
fao_class:
name: fao_class
description: placeholder description; linter will ignore this
title: soil_taxonomic/FAO classification
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0001083
alias: fao_class
owner: Soil
domain_of:
- Agriculture
- Soil
range: FAO_CLASS_ENUM
fire:
name: fire
description: placeholder description; linter will ignore this
title: history/fire
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0001086
alias: fire
owner: Soil
domain_of:
- Agriculture
- Soil
range: string
flooding:
name: flooding
description: placeholder description; linter will ignore this
title: history/flooding
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000319
alias: flooding
owner: Soil
domain_of:
- Agriculture
- Soil
range: string
heavy_metals:
name: heavy_metals
description: placeholder description; linter will ignore this
title: extreme_unusual_properties/heavy metals
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000652
alias: heavy_metals
owner: Soil
domain_of:
- Soil
range: string
pattern: (([^s\|][^\r\n\t\|]*;[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)? [^s\|][^\r\n\t\|]*)\\|)*([^s\|][^\r\n\t\|]*;[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)?
[^s\|][^\r\n\t\|]*)
structured_pattern:
syntax: (({free_text};{float} {unit})\\|)*({free_text};{float} {unit})
heavy_metals_meth:
name: heavy_metals_meth
description: placeholder description; linter will ignore this
title: extreme_unusual_properties/heavy metals method
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000343
alias: heavy_metals_meth
owner: Soil
domain_of:
- Agriculture
- Soil
range: string
pattern: (10.\d{4,9}/[-._;()/:a-zA-Z0-9]+)|(PMID:(\d{7,8}))|((?:https?://)?(?:www\.)?[\w-]+(?:\.[\w-]+)+[\w.,@?^=%&:/~+#-]*[\w@?^=%&/~+#-])
structured_pattern:
syntax: ({DOI})|({PMID})|({URL})
horizon_meth:
name: horizon_meth
description: placeholder description; linter will ignore this
title: horizon method
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000321
alias: horizon_meth
owner: Soil
domain_of:
- Agriculture
- Soil
range: string
pattern: (10.\d{4,9}/[-._;()/:a-zA-Z0-9]+)|(PMID:(\d{7,8}))|((?:https?://)?(?:www\.)?[\w-]+(?:\.[\w-]+)+[\w.,@?^=%&:/~+#-]*[\w@?^=%&/~+#-])
structured_pattern:
syntax: ({DOI})|({PMID})|({URL})
link_addit_analys:
name: link_addit_analys
description: placeholder description; linter will ignore this
title: links to additional analysis
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000340
alias: link_addit_analys
owner: Soil
domain_of:
- Soil
range: string
pattern: (10.\d{4,9}/[-._;()/:a-zA-Z0-9]+)|(PMID:(\d{7,8}))|((?:https?://)?(?:www\.)?[\w-]+(?:\.[\w-]+)+[\w.,@?^=%&:/~+#-]*[\w@?^=%&/~+#-])
structured_pattern:
syntax: ({DOI})|({PMID})|({URL})
link_class_info:
name: link_class_info
description: placeholder description; linter will ignore this
title: link to classification information
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000329
alias: link_class_info
owner: Soil
domain_of:
- Agriculture
- Soil
range: string
pattern: (10.\d{4,9}/[-._;()/:a-zA-Z0-9]+)|(PMID:(\d{7,8}))|((?:https?://)?(?:www\.)?[\w-]+(?:\.[\w-]+)+[\w.,@?^=%&:/~+#-]*[\w@?^=%&/~+#-])
structured_pattern:
syntax: ({DOI})|({PMID})|({URL})
link_climate_info:
name: link_climate_info
description: placeholder description; linter will ignore this
title: link to climate information
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000328
alias: link_climate_info
owner: Soil
domain_of:
- Agriculture
- Soil
range: string
pattern: (10.\d{4,9}/[-._;()/:a-zA-Z0-9]+)|(PMID:(\d{7,8}))|((?:https?://)?(?:www\.)?[\w-]+(?:\.[\w-]+)+[\w.,@?^=%&:/~+#-]*[\w@?^=%&/~+#-])
structured_pattern:
syntax: ({DOI})|({PMID})|({URL})
local_class:
name: local_class
description: placeholder description; linter will ignore this
title: soil_taxonomic/local classification
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000330
alias: local_class
owner: Soil
domain_of:
- Agriculture
- Soil
range: string
pattern: '[^s\|][^\r\n\t\|]*'
structured_pattern:
syntax: '{free_text}'
local_class_meth:
name: local_class_meth
description: placeholder description; linter will ignore this
title: soil_taxonomic/local classification method
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000331
alias: local_class_meth
owner: Soil
domain_of:
- Agriculture
- Soil
range: string
pattern: (10.\d{4,9}/[-._;()/:a-zA-Z0-9]+)|(PMID:(\d{7,8}))|((?:https?://)?(?:www\.)?[\w-]+(?:\.[\w-]+)+[\w.,@?^=%&:/~+#-]*[\w@?^=%&/~+#-])
structured_pattern:
syntax: ({DOI})|({PMID})|({URL})
microbial_biomass:
name: microbial_biomass
description: placeholder description; linter will ignore this
title: microbial biomass
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000650
alias: microbial_biomass
owner: Soil
domain_of:
- Agriculture
- Soil
range: string
pattern: '[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)? [^s\|][^\r\n\t\|]*'
structured_pattern:
syntax: '{float} {unit}'
misc_param:
name: misc_param
description: placeholder description; linter will ignore this
title: miscellaneous parameter
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000752
alias: misc_param
owner: Soil
domain_of:
- Agriculture
- Air
- FoodAnimalAndAnimalFeed
- FoodFarmEnvironment
- FoodFoodProductionFacility
- FoodHumanFoods
- HostAssociated
- HumanAssociated
- HumanGut
- HumanOral
- HumanSkin
- HumanVaginal
- HydrocarbonResourcesCores
- HydrocarbonResourcesFluidsSwabs
- MicrobialMatBiofilm
- MiscellaneousNaturalOrArtificialEnvironment
- PlantAssociated
- Sediment
- Soil
- SymbiontAssociated
- WastewaterSludge
- Water
range: string
pattern: (([^s\|][^\r\n\t\|]*;[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)? [^s\|][^\r\n\t\|]*)\\|)*([^s\|][^\r\n\t\|]*;[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)?
[^s\|][^\r\n\t\|]*)
structured_pattern:
syntax: (({free_text};{float} {unit})\\|)*({free_text};{float} {unit})
org_matter:
name: org_matter
description: placeholder description; linter will ignore this
title: organic matter
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000204
alias: org_matter
owner: Soil
domain_of:
- MicrobialMatBiofilm
- MiscellaneousNaturalOrArtificialEnvironment
- Sediment
- Soil
- Water
range: string
pattern: '[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)? [^s\|][^\r\n\t\|]*'
structured_pattern:
syntax: '{float} {unit}'
org_nitro:
name: org_nitro
description: placeholder description; linter will ignore this
title: organic nitrogen
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000205
alias: org_nitro
owner: Soil
domain_of:
- MicrobialMatBiofilm
- MiscellaneousNaturalOrArtificialEnvironment
- Sediment
- Soil
- Water
range: string
pattern: '[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)? [^s\|][^\r\n\t\|]*'
structured_pattern:
syntax: '{float} {unit}'
ph:
name: ph
description: placeholder description; linter will ignore this
title: pH
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0001001
alias: ph
owner: Soil
domain_of:
- FoodFarmEnvironment
- HydrocarbonResourcesCores
- HydrocarbonResourcesFluidsSwabs
- MicrobialMatBiofilm
- MiscellaneousNaturalOrArtificialEnvironment
- Sediment
- Soil
- WastewaterSludge
- Water
range: float
ph_meth:
name: ph_meth
description: placeholder description; linter will ignore this
title: pH method
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0001106
alias: ph_meth
owner: Soil
domain_of:
- Agriculture
- FoodFarmEnvironment
- Soil
range: string
pattern: (10.\d{4,9}/[-._;()/:a-zA-Z0-9]+)|(PMID:(\d{7,8}))|((?:https?://)?(?:www\.)?[\w-]+(?:\.[\w-]+)+[\w.,@?^=%&:/~+#-]*[\w@?^=%&/~+#-])
structured_pattern:
syntax: ({DOI})|({PMID})|({URL})
pool_dna_extracts:
name: pool_dna_extracts
description: placeholder description; linter will ignore this
title: pooling of DNA extracts (if done)
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000325
alias: pool_dna_extracts
owner: Soil
domain_of:
- Agriculture
- FoodAnimalAndAnimalFeed
- FoodFoodProductionFacility
- FoodHumanFoods
- Soil
range: string
previous_land_use:
name: previous_land_use
description: placeholder description; linter will ignore this
title: history/previous land use
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000315
alias: previous_land_use
owner: Soil
domain_of:
- Agriculture
- FoodFarmEnvironment
- Soil
range: string
previous_land_use_meth:
name: previous_land_use_meth
description: placeholder description; linter will ignore this
title: history/previous land use method
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000316
alias: previous_land_use_meth
owner: Soil
domain_of:
- Agriculture
- Soil
range: string
pattern: (10.\d{4,9}/[-._;()/:a-zA-Z0-9]+)|(PMID:(\d{7,8}))|((?:https?://)?(?:www\.)?[\w-]+(?:\.[\w-]+)+[\w.,@?^=%&:/~+#-]*[\w@?^=%&/~+#-])
structured_pattern:
syntax: ({DOI})|({PMID})|({URL})
profile_position:
name: profile_position
description: placeholder description; linter will ignore this
title: profile position
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0001084
alias: profile_position
owner: Soil
domain_of:
- Agriculture
- Soil
range: PROFILE_POSITION_ENUM
salinity_meth:
name: salinity_meth
description: placeholder description; linter will ignore this
title: salinity method
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000341
alias: salinity_meth
owner: Soil
domain_of:
- FoodFarmEnvironment
- Soil
range: string
pattern: (10.\d{4,9}/[-._;()/:a-zA-Z0-9]+)|(PMID:(\d{7,8}))|((?:https?://)?(?:www\.)?[\w-]+(?:\.[\w-]+)+[\w.,@?^=%&:/~+#-]*[\w@?^=%&/~+#-])
structured_pattern:
syntax: ({DOI})|({PMID})|({URL})
samp_vol_we_dna_ext:
name: samp_vol_we_dna_ext
description: placeholder description; linter will ignore this
title: sample volume or weight for DNA extraction
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000111
alias: samp_vol_we_dna_ext
owner: Soil
domain_of:
- Agriculture
- Air
- Checklist
- FoodAnimalAndAnimalFeed
- FoodFarmEnvironment
- FoodFoodProductionFacility
- FoodHumanFoods
- HostAssociated
- HumanAssociated
- HumanGut
- HumanOral
- HumanSkin
- HumanVaginal
- HydrocarbonResourcesCores
- HydrocarbonResourcesFluidsSwabs
- MicrobialMatBiofilm
- MigsBa
- MigsEu
- MigsOrg
- MigsPl
- MigsVi
- Mimag
- MimarksC
- MimarksS
- Mims
- Misag
- MiscellaneousNaturalOrArtificialEnvironment
- Miuvig
- PlantAssociated
- Sediment
- Soil
- SymbiontAssociated
- WastewaterSludge
- Water
range: string
pattern: '[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)? [^s\|][^\r\n\t\|]*'
structured_pattern:
syntax: '{float} {unit}'
season_precpt:
name: season_precpt
description: placeholder description; linter will ignore this
title: mean seasonal precipitation
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000645
alias: season_precpt
owner: Soil
domain_of:
- Agriculture
- FoodFarmEnvironment
- Soil
range: string
pattern: '[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)? [^s\|][^\r\n\t\|]*'
structured_pattern:
syntax: '{float} {unit}'
season_temp:
name: season_temp
description: placeholder description; linter will ignore this
title: mean seasonal temperature
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000643
alias: season_temp
owner: Soil
domain_of:
- Agriculture
- FoodFarmEnvironment
- Soil
range: string
pattern: '[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)? [^s\|][^\r\n\t\|]*'
structured_pattern:
syntax: '{float} {unit}'
sieving:
name: sieving
description: placeholder description; linter will ignore this
title: composite design/sieving
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000322
alias: sieving
owner: Soil
domain_of:
- Agriculture
- Soil
range: string
slope_aspect:
name: slope_aspect
description: placeholder description; linter will ignore this
title: slope aspect
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000647
alias: slope_aspect
owner: Soil
domain_of:
- Agriculture
- Soil
range: string
pattern: '[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)? [^s\|][^\r\n\t\|]*'
structured_pattern:
syntax: '{float} {unit}'
slope_gradient:
name: slope_gradient
description: placeholder description; linter will ignore this
title: slope gradient
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000646
alias: slope_gradient
owner: Soil
domain_of:
- Agriculture
- Soil
range: string
pattern: '[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)? [^s\|][^\r\n\t\|]*'
structured_pattern:
syntax: '{float} {unit}'
soil_type:
name: soil_type
description: placeholder description; linter will ignore this
title: soil type
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000332
alias: soil_type
owner: Soil
domain_of:
- Agriculture
- FoodFarmEnvironment
- Soil
range: string
pattern: '[^s\|][^\r\n\t\|]* [[a-zA-Z]+:[0-9]+]'
structured_pattern:
syntax: '{term_label} [{term_id}]'
soil_type_meth:
name: soil_type_meth
description: placeholder description; linter will ignore this
title: soil type method
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000334
alias: soil_type_meth
owner: Soil
domain_of:
- Agriculture
- FoodFarmEnvironment
- Soil
range: string
pattern: (10.\d{4,9}/[-._;()/:a-zA-Z0-9]+)|(PMID:(\d{7,8}))|((?:https?://)?(?:www\.)?[\w-]+(?:\.[\w-]+)+[\w.,@?^=%&:/~+#-]*[\w@?^=%&/~+#-])
structured_pattern:
syntax: ({DOI})|({PMID})|({URL})
store_cond:
name: store_cond
description: placeholder description; linter will ignore this
title: storage conditions
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000327
alias: store_cond
owner: Soil
domain_of:
- Agriculture
- Soil
range: string
pattern: '[^s\|][^\r\n\t\|]*;P(?=\d+[YMWD])(\d+Y)?(\d+M)?(\d+W)?(\d+D)?(T(?=\d+[HMS])(\d+H)?(\d+M)?(\d+S)?)?'
structured_pattern:
syntax: '{free_text};{period}'
temp:
name: temp
description: placeholder description; linter will ignore this
title: temperature
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000113
alias: temp
owner: Soil
domain_of:
- Agriculture
- Air
- Checklist
- FoodAnimalAndAnimalFeed
- FoodFarmEnvironment
- FoodHumanFoods
- HostAssociated
- HumanAssociated
- HumanGut
- HumanOral
- HumanSkin
- HumanVaginal
- HydrocarbonResourcesCores
- HydrocarbonResourcesFluidsSwabs
- MicrobialMatBiofilm
- MigsBa
- MigsEu
- MigsOrg
- MigsPl
- MigsVi
- Mimag
- MimarksC
- MimarksS
- Mims
- Misag
- MiscellaneousNaturalOrArtificialEnvironment
- Miuvig
- PlantAssociated
- Sediment
- Soil
- SymbiontAssociated
- WastewaterSludge
- Water
range: string
pattern: '[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)? [^s\|][^\r\n\t\|]*'
structured_pattern:
syntax: '{float} {unit}'
tillage:
name: tillage
description: placeholder description; linter will ignore this
title: history/tillage
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0001081
multivalued: true
alias: tillage
owner: Soil
domain_of:
- Agriculture
- FoodFarmEnvironment
- Soil
range: TILLAGE_ENUM
tot_org_c_meth:
name: tot_org_c_meth
description: placeholder description; linter will ignore this
title: total organic carbon method
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000337
alias: tot_org_c_meth
owner: Soil
domain_of:
- Agriculture
- FoodFarmEnvironment
- Soil
range: string
pattern: (10.\d{4,9}/[-._;()/:a-zA-Z0-9]+)|(PMID:(\d{7,8}))|((?:https?://)?(?:www\.)?[\w-]+(?:\.[\w-]+)+[\w.,@?^=%&:/~+#-]*[\w@?^=%&/~+#-])
structured_pattern:
syntax: ({DOI})|({PMID})|({URL})
tot_org_carb:
name: tot_org_carb
description: placeholder description; linter will ignore this
title: total organic carbon
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000533
alias: tot_org_carb
owner: Soil
domain_of:
- Agriculture
- FoodFarmEnvironment
- MicrobialMatBiofilm
- Sediment
- Soil
range: string
water_cont_soil_meth:
name: water_cont_soil_meth
description: placeholder description; linter will ignore this
title: water content method
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000323
alias: water_cont_soil_meth
owner: Soil
domain_of:
- Soil
range: string
pattern: (10.\d{4,9}/[-._;()/:a-zA-Z0-9]+)|(PMID:(\d{7,8}))|((?:https?://)?(?:www\.)?[\w-]+(?:\.[\w-]+)+[\w.,@?^=%&:/~+#-]*[\w@?^=%&/~+#-])
structured_pattern:
syntax: ({DOI})|({PMID})|({URL})
water_content:
name: water_content
description: placeholder description; linter will ignore this
title: water content
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000185
alias: water_content
owner: Soil
domain_of:
- MicrobialMatBiofilm
- Sediment
- Soil
range: string
pattern: '[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)? [^s\|][^\r\n\t\|]*'
structured_pattern:
syntax: '{float} {unit}'
elev:
name: elev
description: placeholder description; linter will ignore this
title: elevation
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000093
alias: elev
owner: Soil
domain_of:
- Agriculture
- Air
- Checklist
- HostAssociated
- HydrocarbonResourcesCores
- MicrobialMatBiofilm
- MigsBa
- MigsEu
- MigsOrg
- MigsPl
- MigsVi
- Mimag
- MimarksC
- MimarksS
- Mims
- Misag
- MiscellaneousNaturalOrArtificialEnvironment
- Miuvig
- PlantAssociated
- Sediment
- Soil
- SymbiontAssociated
- Water
range: string
required: true
pattern: '[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)? [^s\|][^\r\n\t\|]*'
structured_pattern:
syntax: '{float} {unit}'
project_name:
name: project_name
description: placeholder description; linter will ignore this
title: project name
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
rank: 1000
slot_uri: MIXS:0000092
alias: project_name
owner: Soil
domain_of:
- Air
- BuiltEnvironment
- Checklist
- FoodAnimalAndAnimalFeed
- FoodFarmEnvironment
- FoodFoodProductionFacility
- FoodHumanFoods
- HostAssociated
- HumanAssociated
- HumanGut
- HumanOral
- HumanSkin
- HumanVaginal
- HydrocarbonResourcesCores
- HydrocarbonResourcesFluidsSwabs
- MicrobialMatBiofilm
- MigsBa
- MigsEu
- MigsOrg
- MigsPl
- MigsVi
- Mimag
- MimarksC
- MimarksS
- Mims
- Misag
- MiscellaneousNaturalOrArtificialEnvironment
- Miuvig
- PlantAssociated
- Sediment
- Soil
- SymbiontAssociated
- WastewaterSludge
- Water
range: string
required: true
pattern: '[^s\|][^\r\n\t\|]*'
structured_pattern:
syntax: '{free_text}'
class_uri: MIXS:0016012