Slot: sim_search_meth
Tool used to compare ORFs with database, along with version and cutoffs used
URI: mixs.vocab:MISAG_sim_search_meth
Domain and Range
Parents
- is_a: sim_search_meth
Children
Used by
- MISAG
- AirMISAG
- BuiltEnvironmentMISAG
- Host-associatedMISAG
- Human-associatedMISAG
- Human-gutMISAG
- Human-oralMISAG
- Human-skinMISAG
- Human-vaginalMISAG
- HydrocarbonResources-coresMISAG
- HydrocarbonResources-fluidsSwabsMISAG
- MicrobialMatBiofilmMISAG
- MiscellaneousNaturalOrArtificialEnvironmentMISAG
- Plant-associatedMISAG
- SedimentMISAG
- SoilMISAG
- WastewaterSludgeMISAG
- WaterMISAG
Other properties
| Aliases: | similarity search method | |
| Mappings: | MIXS:0000063 | |
| Comments: | Expected value: names and versions of software(s), parameters used | |
| Examples: | Example(value='HMMER3;3.1b2;hmmsearch, cutoff of 50 on score', description=None) |