Slot: sim_search_meth
Tool used to compare ORFs with database, along with version and cutoffs used
URI: mixs.vocab:MIMS_sim_search_meth
Domain and Range
Parents
- is_a: sim_search_meth
Children
Used by
- MIMS
- AirMIMS
- BuiltEnvironmentMIMS
- Host-associatedMIMS
- Human-associatedMIMS
- Human-gutMIMS
- Human-oralMIMS
- Human-skinMIMS
- Human-vaginalMIMS
- HydrocarbonResources-coresMIMS
- HydrocarbonResources-fluidsSwabsMIMS
- MicrobialMatBiofilmMIMS
- MiscellaneousNaturalOrArtificialEnvironmentMIMS
- Plant-associatedMIMS
- SedimentMIMS
- SoilMIMS
- WastewaterSludgeMIMS
- WaterMIMS
Other properties
Aliases: | similarity search method | |
Mappings: | MIXS:0000063 | |
Comments: | Expected value: names and versions of software(s), parameters used | |
Examples: | Example(value='HMMER3;3.1b2;hmmsearch, cutoff of 50 on score', description=None) |