Slot: sim_search_meth

Tool used to compare ORFs with database, along with version and cutoffs used

URI: mixs.vocab:MIMS_sim_search_meth

Domain and Range

MIMS → _0..1 String

Parents

• is_a: sim_search_meth

Children

Used by

• MIMS
• AirMIMS
• BuiltEnvironmentMIMS
• Host-associatedMIMS
• Human-associatedMIMS
• Human-gutMIMS
• Human-oralMIMS
• Human-skinMIMS
• Human-vaginalMIMS
• HydrocarbonResources-coresMIMS
• HydrocarbonResources-fluidsSwabsMIMS
• MicrobialMatBiofilmMIMS
• MiscellaneousNaturalOrArtificialEnvironmentMIMS
• Plant-associatedMIMS
• SedimentMIMS
• SoilMIMS
• WastewaterSludgeMIMS
• WaterMIMS

Other properties

Aliases:		similarity search method
Mappings:		MIXS:0000063
Comments:		Expected value: names and versions of software(s), parameters used
Examples:		Example(value='HMMER3;3.1b2;hmmsearch, cutoff of 50 on score', description=None)