Slot: chimera_check

Tool(s) used for chimera checking, including version number and parameters, to discover and remove chimeric sequences. A chimeric sequence is comprised of two or more phylogenetically distinct parent sequences.

URI: mixs.vocab:MIMARKS_survey_chimera_check

Domain and Range

MIMARKSSurvey → _0..1 String

Parents

• is_a: chimera_check

Children

Used by

• MIMARKSSurvey
• AirMIMARKSSurvey
• BuiltEnvironmentMIMARKSSurvey
• Host-associatedMIMARKSSurvey
• Human-associatedMIMARKSSurvey
• Human-gutMIMARKSSurvey
• Human-oralMIMARKSSurvey
• Human-skinMIMARKSSurvey
• Human-vaginalMIMARKSSurvey
• HydrocarbonResources-coresMIMARKSSurvey
• HydrocarbonResources-fluidsSwabsMIMARKSSurvey
• MicrobialMatBiofilmMIMARKSSurvey
• MiscellaneousNaturalOrArtificialEnvironmentMIMARKSSurvey
• Plant-associatedMIMARKSSurvey
• SedimentMIMARKSSurvey
• SoilMIMARKSSurvey
• WastewaterSludgeMIMARKSSurvey
• WaterMIMARKSSurvey

Other properties

Aliases:		chimera check software
Mappings:		MIXS:0000052
Comments:		Expected value: name and version of software, parameters used
Examples:		Example(value='uchime;v4.1;default parameters', description=None)