Slot: source_mat_id
A unique identifier assigned to a material sample (as defined by http://rs.tdwg.org/dwc/terms/materialSampleID, and as opposed to a particular digital record of a material sample) used for extracting nucleic acids, and subsequent sequencing. The identifier can refer either to the original material collected or to any derived sub-samples. The INSDC qualifiers /specimen_voucher, /bio_material, or /culture_collection may or may not share the same value as the source_mat_id field. For instance, the /specimen_voucher qualifier and source_mat_id may both contain 'UAM:Herps:14' , referring to both the specimen voucher and sampled tissue with the same identifier. However, the /culture_collection qualifier may refer to a value from an initial culture (e.g. ATCC:11775) while source_mat_id would refer to an identifier from some derived culture from which the nucleic acids were extracted (e.g. xatc123 or ark:/2154/R2).
URI: mixs.vocab:MIMARKS_specimen_source_mat_id
Domain and Range
MIMARKSSpecimen → 0..1 String
Parents
- is_a: source_mat_id
Children
Used by
- MIMARKSSpecimen
- AirMIMARKSSpecimen
- BuiltEnvironmentMIMARKSSpecimen
- Host-associatedMIMARKSSpecimen
- Human-associatedMIMARKSSpecimen
- Human-gutMIMARKSSpecimen
- Human-oralMIMARKSSpecimen
- Human-skinMIMARKSSpecimen
- Human-vaginalMIMARKSSpecimen
- HydrocarbonResources-coresMIMARKSSpecimen
- HydrocarbonResources-fluidsSwabsMIMARKSSpecimen
- MicrobialMatBiofilmMIMARKSSpecimen
- MiscellaneousNaturalOrArtificialEnvironmentMIMARKSSpecimen
- Plant-associatedMIMARKSSpecimen
- SedimentMIMARKSSpecimen
- SoilMIMARKSSpecimen
- WastewaterSludgeMIMARKSSpecimen
- WaterMIMARKSSpecimen
Other properties
Aliases: | source material identifiers | |
Mappings: | MIXS:0000026 | |
Comments: | Expected value: for cultures of microorganisms: identifiers for two culture collections; for other material a unique arbitrary identifer | |
Examples: | Example(value='MPI012345', description=None) |