Slot: chimera_check
Tool(s) used for chimera checking, including version number and parameters, to discover and remove chimeric sequences. A chimeric sequence is comprised of two or more phylogenetically distinct parent sequences.
URI: mixs.vocab:MIMARKS_specimen_chimera_check
Domain and Range
MIMARKSSpecimen → 0..1 String
Parents
- is_a: chimera_check
Children
Used by
- MIMARKSSpecimen
- AirMIMARKSSpecimen
- BuiltEnvironmentMIMARKSSpecimen
- Host-associatedMIMARKSSpecimen
- Human-associatedMIMARKSSpecimen
- Human-gutMIMARKSSpecimen
- Human-oralMIMARKSSpecimen
- Human-skinMIMARKSSpecimen
- Human-vaginalMIMARKSSpecimen
- HydrocarbonResources-coresMIMARKSSpecimen
- HydrocarbonResources-fluidsSwabsMIMARKSSpecimen
- MicrobialMatBiofilmMIMARKSSpecimen
- MiscellaneousNaturalOrArtificialEnvironmentMIMARKSSpecimen
- Plant-associatedMIMARKSSpecimen
- SedimentMIMARKSSpecimen
- SoilMIMARKSSpecimen
- WastewaterSludgeMIMARKSSpecimen
- WaterMIMARKSSpecimen
Other properties
Aliases: | chimera check software | |
Mappings: | MIXS:0000052 | |
Comments: | Expected value: name and version of software, parameters used | |
Examples: | Example(value='uchime;v4.1;default parameters', description=None) |