Slot: sim_search_meth
Tool used to compare ORFs with database, along with version and cutoffs used
URI: mixs.vocab:MIGS_virus_sim_search_meth
Domain and Range
Parents
- is_a: sim_search_meth
Children
Used by
- MIGSVirus
- AirMIGSVirus
- BuiltEnvironmentMIGSVirus
- Host-associatedMIGSVirus
- Human-associatedMIGSVirus
- Human-gutMIGSVirus
- Human-oralMIGSVirus
- Human-skinMIGSVirus
- Human-vaginalMIGSVirus
- HydrocarbonResources-coresMIGSVirus
- HydrocarbonResources-fluidsSwabsMIGSVirus
- MicrobialMatBiofilmMIGSVirus
- MiscellaneousNaturalOrArtificialEnvironmentMIGSVirus
- Plant-associatedMIGSVirus
- SedimentMIGSVirus
- SoilMIGSVirus
- WastewaterSludgeMIGSVirus
- WaterMIGSVirus
Other properties
| Aliases: | similarity search method | |
| Mappings: | MIXS:0000063 | |
| Comments: | Expected value: names and versions of software(s), parameters used | |
| Examples: | Example(value='HMMER3;3.1b2;hmmsearch, cutoff of 50 on score', description=None) |