Slot: sim_search_meth
Tool used to compare ORFs with database, along with version and cutoffs used
URI: mixs.vocab:MIGS_plant_sim_search_meth
Domain and Range
Parents
- is_a: sim_search_meth
Children
Used by
- MIGSPlant
- AirMIGSPlant
- BuiltEnvironmentMIGSPlant
- Host-associatedMIGSPlant
- Human-associatedMIGSPlant
- Human-gutMIGSPlant
- Human-oralMIGSPlant
- Human-skinMIGSPlant
- Human-vaginalMIGSPlant
- HydrocarbonResources-coresMIGSPlant
- HydrocarbonResources-fluidsSwabsMIGSPlant
- MicrobialMatBiofilmMIGSPlant
- MiscellaneousNaturalOrArtificialEnvironmentMIGSPlant
- Plant-associatedMIGSPlant
- SedimentMIGSPlant
- SoilMIGSPlant
- WastewaterSludgeMIGSPlant
- WaterMIGSPlant
Other properties
| Aliases: | similarity search method | |
| Mappings: | MIXS:0000063 | |
| Comments: | Expected value: names and versions of software(s), parameters used | |
| Examples: | Example(value='HMMER3;3.1b2;hmmsearch, cutoff of 50 on score', description=None) |