Slot: sim_search_meth
Tool used to compare ORFs with database, along with version and cutoffs used
URI: mixs.vocab:MIGS_org_sim_search_meth
Domain and Range
Parents
- is_a: sim_search_meth
Children
Used by
- MIGSOrg
- AirMIGSOrg
- BuiltEnvironmentMIGSOrg
- Host-associatedMIGSOrg
- Human-associatedMIGSOrg
- Human-gutMIGSOrg
- Human-oralMIGSOrg
- Human-skinMIGSOrg
- Human-vaginalMIGSOrg
- HydrocarbonResources-coresMIGSOrg
- HydrocarbonResources-fluidsSwabsMIGSOrg
- MicrobialMatBiofilmMIGSOrg
- MiscellaneousNaturalOrArtificialEnvironmentMIGSOrg
- Plant-associatedMIGSOrg
- SedimentMIGSOrg
- SoilMIGSOrg
- WastewaterSludgeMIGSOrg
- WaterMIGSOrg
Other properties
| Aliases: | similarity search method | |
| Mappings: | MIXS:0000063 | |
| Comments: | Expected value: names and versions of software(s), parameters used | |
| Examples: | Example(value='HMMER3;3.1b2;hmmsearch, cutoff of 50 on score', description=None) |