Slot: tax_class
Method used for taxonomic classification, along with reference database used, classification rank, and thresholds used to classify new genomes
URI: mixs.vocab:MIGS_bacteria_tax_class
Domain and Range
MIGSBacteria → 0..1 String
Parents
- is_a: tax_class
Children
Used by
- MIGSBacteria
- AirMIGSBacteria
- BuiltEnvironmentMIGSBacteria
- Host-associatedMIGSBacteria
- Human-associatedMIGSBacteria
- Human-gutMIGSBacteria
- Human-oralMIGSBacteria
- Human-skinMIGSBacteria
- Human-vaginalMIGSBacteria
- HydrocarbonResources-coresMIGSBacteria
- HydrocarbonResources-fluidsSwabsMIGSBacteria
- MicrobialMatBiofilmMIGSBacteria
- MiscellaneousNaturalOrArtificialEnvironmentMIGSBacteria
- Plant-associatedMIGSBacteria
- SedimentMIGSBacteria
- SoilMIGSBacteria
- WastewaterSludgeMIGSBacteria
- WaterMIGSBacteria
Other properties
| Aliases: | taxonomic classification | |
| Mappings: | MIXS:0000064 | |
| Comments: | Expected value: classification method, database name, and other parameters | |
| Examples: | Example(value='vConTACT vContact2 (references from NCBI RefSeq v83, genus rank classification, default parameters)', description=None) |