Slot: source_mat_id
A unique identifier assigned to a material sample (as defined by http://rs.tdwg.org/dwc/terms/materialSampleID, and as opposed to a particular digital record of a material sample) used for extracting nucleic acids, and subsequent sequencing. The identifier can refer either to the original material collected or to any derived sub-samples. The INSDC qualifiers /specimen_voucher, /bio_material, or /culture_collection may or may not share the same value as the source_mat_id field. For instance, the /specimen_voucher qualifier and source_mat_id may both contain 'UAM:Herps:14' , referring to both the specimen voucher and sampled tissue with the same identifier. However, the /culture_collection qualifier may refer to a value from an initial culture (e.g. ATCC:11775) while source_mat_id would refer to an identifier from some derived culture from which the nucleic acids were extracted (e.g. xatc123 or ark:/2154/R2).
URI: mixs.vocab:MIGS_bacteria_source_mat_id
Domain and Range
MIGSBacteria → 0..1 String
Parents
- is_a: source_mat_id
Children
Used by
- MIGSBacteria
- AirMIGSBacteria
- BuiltEnvironmentMIGSBacteria
- Host-associatedMIGSBacteria
- Human-associatedMIGSBacteria
- Human-gutMIGSBacteria
- Human-oralMIGSBacteria
- Human-skinMIGSBacteria
- Human-vaginalMIGSBacteria
- HydrocarbonResources-coresMIGSBacteria
- HydrocarbonResources-fluidsSwabsMIGSBacteria
- MicrobialMatBiofilmMIGSBacteria
- MiscellaneousNaturalOrArtificialEnvironmentMIGSBacteria
- Plant-associatedMIGSBacteria
- SedimentMIGSBacteria
- SoilMIGSBacteria
- WastewaterSludgeMIGSBacteria
- WaterMIGSBacteria
Other properties
Aliases: | source material identifiers | |
Mappings: | MIXS:0000026 | |
Comments: | Expected value: for cultures of microorganisms: identifiers for two culture collections; for other material a unique arbitrary identifer | |
Examples: | Example(value='MPI012345', description=None) |